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Publication

2024

   1. Isomerism of Cyclodextrin Tetramer Induced by Alkali Halide Cluster Ions Observed by Ion Mobility Spectrometry-Mass Spectrometry

J, Lee.; Y, Ahn.; M, Kim.; J, Seo.*

Journal of the American Society for Mass Spectrometry, 2024, 35, 3, 622–630.

 

2023

   1. Controlling π–π Interactions of Highly Soluble Naphthalene Diimide Derivatives for Neutral pH Aqueous Redox Flow Batteries

Singh, V.†; Kwon, S.†; Choi, Y.†; Ahn, S.; Kang, G.; Yi, Y.; Lim, M. H.; Seo, J.*; Baik, M. H.*; Byon. H. R.* 

Advanced Materials, 2023, 2210859.

   2. Distinguishing Protein Chemical Topologies Using Supercharging Ion Mobility Spectrometry-Mass Spectrometry

J, Lee.; D, Im.; Y, Liu.; J, Fang.; X, Tian.; M, Kim.; W,-B, Zhang*.; J, Seo* 

Angew. Chem. Int. Ed. 2023, e202314980

   3. Protomer of Imipramine Captured in Cucurbit[7]uril

Lee, J.; Kim, H.; Lee, H.; Boraste, D. R.; Kim, K.; Seo, J.* 

The Journal of Physical Chemistry A, 2023, 127, 51, 10758–10765.

2022

   1. Cellular synthesis of protein pretzelanes

Bai, X.; Liu, Y.; Lee, J.; Fang, J.; Wu, W.-H.; Seo, J.; Zhang, W.-B.

Giant, 2021, 10, 100092.

   2. Cobalt-Catalyzed Formation of Grignard Reagents via C-O or C-S Bond Activation

Pietrasiak, E.; Ha, S.; Jeon, S.; Jeong, J.; Lee, J.; Seo, J.*; Lee, E.*

The Journal of Organic Chemistry, 2022, 87 (13), 8380-8389.

   3. Trapping Alkali Halide Cluster Ions Inside the Cucurbit[7]uril Cavity

Lee, J.†; Jang, S.†; Kim, M.; Boraste, D.R.; Kim, K.; Park, K.; Seo,J.*

The Journal of Physical Chemistry Letters, 2022, 13(41), 9581–9588.

 

2021

   1. Nickelocene as an Air- and Moisture-Tolerant Precatalyst in the Regioselective Synthesis of Multisubstituted Pyridines

Cho, I. Y.;Kim, W. G.; Jeon, J. H.; Lee, J. W.; Seo, J. K.; Seo, J.*; Hong, S. Y.*

The Journal of Organic Chemistry, 2021, 86 (14), 9328-9343.

   2. Li+ and Li+I-Li+ ions Solvated by 1,4-dioxane: An ion Mobility Spectrometry-Mass Spectrometry Study

Choi, Y.; Ji, I.; Seo, J.*

Mass Spectrometry Letters, 2021, 12 (4), 152-158.

   3.  Visualization of lipophagy using a supramolecular FRET pair

Lee, A.; Li, M.; Ko, Y. H.; Park, S.; Seo, J.; Park, K. M.; Kim, K.

Chemical Communications, 2021, 57 (91), 12179-12182.

2020

   1. Advances in Ion Mobility Spectrometry-Mass Spectrometry (IMS-MS)-Based Techniques for Elucidating Higher-Order Protein Structures

Seo, J*

Mass Spectrometry Letters,11(4), 65–70

   2. Lasso Proteins: Modular Design, Cellular Synthesis, and Topological Transformation

Liu, Y.; Wu, W.-H.; Hong, S.; Fang, J.; Zhang, F.; Liu, G.-X.; Seo, J.*; Zhang, W.-B*

Angewandte Chemie International Edition 2020, 59 (43), 19153-19161.

   3.  Hierarchical Self-Assembly of Poly-Pseudorotaxanes into Artificial Microtubules.

Hwang, W.; Yoo, J.; Hwang, I.-C.; Lee, J.; Ko, Y. H.; Kim, H. W.; Kim, Y.; Lee, Y.; Hur, M. Y.; Park, K. M.; Seo, J.; Baek, K.*; Kim, K.*

Angewandte Chemie International Edition 2020, 59 (9), 3460-3464.

   4. Annulative π-Extension of Unactivated Benzene Derivatives through Nondirected C–H Arylation

Lee, J. B.; Jeon, M. H.; Seo, J. K.; von Helden, G.; Rohde, J.-U.; Zhao, B. S.*; Seo, J.*; Hong, S. Y.*

Organic Letters 2019, 21 (17), 7004-7008.

   5. Superacid-Mediated Functionalization of Hydroxylated Cucurbit[n]urils

Ghosh, S. K.; Dhamija, A.; Ko, Y. H.; An, J.; Hur, M. Y.; Boraste, D. R.; Seo, J.; Lee, E.*; Park, K. M.*; Kim, K*

Journal of the American Chemical Society 2019, 141 (44), 17503-17506.

 

2019

  1. An Intrinsic Hydrophobicity Scale for Amino Acids and Its Application to Fluorinated Compounds

Hoffmann, W.; Langenhan, J; Huhmann, S.; Moschner, J.; Chang, R.; Accorsi, M.; Seo, J.; Jörg, R.; Meijer, G.; Koksch, B.; Bowers, M. T.; von Helden, G.; Pagel, K.*

Angew. Chem. Int. Ed. 2019, 58, 8216–8220.

   2. Effects of Intramolecular Hydrogen Bonds on the Collision-Induced Dissociation of Tryptic Peptide Ions

Seo, J.; Yoon, H.-J.; Shin, S. K.*

Int. J. Mass Spectrom. 2019, 435, 272–279.

   3. Structural Characterization of Molybdenium Oxide Nanoclusters Using Ion Mobility Spectrometry-Mass Spectrometry and Infrared Action Spectroscopy

Marianski, M.†; Seo, J.†; Mucha, E.; Thomas, D. A.; Jung, S.; Schlögl, R.; Meijer, G.; Trunschke, A.*; von Helden, G.*

J. Phys. Chem. C, 2019, 123, 7845–7853.

2018

  1. The Structure of the Protonated Serine Octamer

Scutelnic, V.; Perez, M. A. S.; Marianski, M.; Warnke, S.; Gregor, A.; Röthlisberger, U.; Bowers, M. T.; Baldauf, C.; von Helden, G.; Rizzo, T. R.; Seo, J.*

J. Am. Chem. Soc. 2018, 140, 7554–7565 (Selected as an Editors' Choice Article)

* Featured in C&EN News, volume 96, issue 19 : "Serine octamer reveals its structure."

   2. Side-Chain Effects on the Structures of Protonated Amino Acid Dimers: A Gas-Phase Infrared Spectroscopic Study

Seo, J.; Hoffmann, W.; Malerz, S.; Warnke, S.; Bowers, M. T.; Pagel, K.; von Helden, G.*

Int. J. Mass Spectrom. 2018, 429, 115–120.

~ 2017

  1. Infrared Spectrum and Structure of the Homochiral Serine Octamer-Dichloride Complex

Seo, J.*; Warnke, S.; Pagel, K.; Bowers, M. T.; von Helden, G.*

Nat. Chem. 2017, 9, 1263–1268.

   2. From Compact to String – The Role of Secondary and Tertiary Structure in Charge-Induced Unzipping of Gas-Phase Proteins

Warnke, S.; Hoffmann, W.; Seo, J.; De Genst, E.; von Helden, G.; Pagel, K.*

J. Am. Soc. Mass Spectrom. 2017, 28, 638–646.

   3. Label-Free Measurement of the Yeast Short Chain TAG Lipase Activity by ESI-MS After One-Step Esterification

Ham, H. J.†; Seo, J.†; Yoon, H.-J.; Shin, S. K.*

J. Lipid Res., 2017, 58, 625–631.

   4. An Infrared Spectroscopy Approach to Follow β-Sheet Formation in Peptide Amyloid Assemblies

Seo, J.†; Hoffmann, W.†; Warnke, S.; Huang, X.; Gewinner, S.; Schöllkopf, W.; Bowers, M. T.; von Helden, G.*; Pagel, K.*

Nat. Chem. 2017, 9, 39–44.

   5. Stacking Geometry of Early Protoporphyrin IX Aggregates Revealed by Gas-Phase Infrared Spectroscopy

Seo, J.; Jang, J.; Warnke, S.; Gewinner, S.; Schöllkopf, W.; von Helden, G.*

J. Am. Chem. Soc. 2016, 138, 16315–16321.

   6. Retention of Native Protein Structure in the Absence of Solvent: A Coupled Ion Mobility and Spectroscopy Study

Seo, J.; Hoffmann, W.; Warnke, S.; Bowers, M. T.; Pagel, K.; von Helden, G.*

Angew. Chem. Int. Ed. 2016, 55, 14173–14176. (VIP Article, featured in back cover)

   7. The Impact of Environment and Resonance Effects on the Site of Protonation of Aminobenzoic Acid Derivatives

Seo, J.; Warnke, S.; Gewinner, S.; Schöllkopf, W.; Bowers, M. T.; Pagel, K.; von Helden, G.*

Phys. Chem. Chem. Phys. 2016, 18, 25474–25482.

   8. Conformational Shift of a β-Hairpin Peptide upon Complex Formation with an Oligo-proline Peptide Studied by Mass Spectrometry

Kölbel, K.; Warnke, S.; Seo, J.; von Helden, G.; Moretti, R.; Meiler, J.; Pagel, K.; Sinz, A.*

ChemistrySelect, 2016, 1, 3651–3656.

   9. Assessing the Stability of Alanine-Based Helices by Conformer-Selective IR Spectroscopy

Hoffmann, W.; Marianski, M.; Warnke, S.; Seo, J.; Baldauf, C.; von Helden, G.; Pagel, K.*

Phys. Chem. Chem. Phys. 2016, 18, 19950–19954.

   10. Protomers of Benzocaine: Solvent and Permittivity Dependence

Warnke, S.; Seo, J.; Boschmans, J.; Sobott, F.; Scrivens, J. H.; Bleiholder, C.; Bowers, M. T.; Gewinner, S.; Schöllkopf, W.; Pagel, K.*; von Helden, G.*

J. Am. Chem. Soc. 2015, 137, 4236–4242.

   11. Multi-Functional MBIT for Peptide Tandem Mass Spectrometry

Yoon, H.-J.; Seo, J.; Shin, S. K.*

Mass Spectrom. Rev. 2015, 34, 209–218.

   12. Energy- and Time-Dependent Branching to Competing Paths in Coupled Unimolecular Dissociations of Chlorotoluene Radical Cations

Seo, J.; Kim, S.-J.; Shin, S. K.*

Bull. Kor. Chem. Soc. 2014, 35, 833–838.

   13. Coupled Unimolecular Dissociation Kinetics of Bromotoluene Radical Cations

Seo, J.; Kim, S.-J.; Shin, S. K.*

J. Phys. Chem. A 2013, 117, 11924–11932.

   14. Host-Guest Chemistry from Solution to the Gas Phase: An Essential Role of Direct Interaction with Water for High-Affinity Binding of Cucurbit[n]urils

Lee, S. J. C.; Lee, J. W.; Lee, H. H.; Seo, J.; Noh, D. H.; Koh, Y. H.; Kim, K.*; Kim, H. I.*

J. Phys. Chem. B 2013, 117, 8855–8864.

   15. N-Acylated Dipeptide Tags Enable Precise Measurement of Ion Temperature in Peptide Fragmentation

Seo, J.; Suh, M.-S.; Yoon, H.-J.; Shin, S. K.*

J. Phys. Chem. B 2012, 116, 13982–13990.

   16. Specific and Nonspecific Bindings of Alkaline-Earth Metal Ions to Guanine-Quadruplex Thrombin-Binding Aptamer DNA

Seo, J.; Hong, E. S.; Yoon, H.-J.; Shin, S. K.*

Int. J. Mass Spectrom. 2012, 330–332, 262–270.

   17. Anisotropic Etching of Semiconductor Nanocrystals

Lim, S. J.; Kim, W.; Jung, S.; Seo, J.; Shin, S. K.*

Chem. Mater. 2011, 23, 5029–5036.

   18. Quantification of Tryptic Peptides in Quadrupole Ion Trap Using High-Mass Signals Derived from Isotope-Coded N-Acetyl Dipeptide Tags

Seo, J.; Yoon, H.-J.; Shin, S. K.*

J. Am. Soc. Mass Spectrom. 2011, 22, 1668–1677.

   19. Aliphatic Dipeptide Tags for Multi 2-Plex Protein Quantification

Suh, M.-S.; Seo, J.; Thangadurai, T. D.; Rhee, Y. H.; Shin, S. K.; Yoon, H.-J.*

Analyst 2011, 136, 1614–1619.

   20. Noncovalent Binding between Fullerenes and Protonated Porphyrins in the Gas Phase

Jung, S.; Seo, J.; Shin, S. K.*

J. Phys. Chem. A 2010, 114, 11376–11385.

   21. Focused Electrospray Deposition for Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry

Jeong, K.; Seo, J.; Yoon, H.-J.; Shin, S. K.*

Bull. Kor. Chem. Soc. 2010, 31, 2293–2298.

   22. Shell and Ligand-Dependent Blinking of CdSe-Based Core/Shell Nanocrystals

Chon, B.; Lim, S. J.; Kim, W.; Seo, J.; Kang, H.; Joo, T.; Hwang, J.; Shin, S. K.*

Phys. Chem. Chem. Phys. 2010, 12, 9312–9319.

   23. Rules and Trends of Metal Cation Driven Hydride-Transfer Mechanisms in Metal Amidoboranes

Kim, D. Y.; Lee, H. M.; Seo, J.; Shin, S. K.; Kim, K. S.*

Phys. Chem. Chem. Phys. 2010, 12, 5446–5453.

   24. Collisional Activation of Ions by Off-Resonance Irradiation in Ion Cyclotron Resonance Spectrometry

Shin, S. K.*; Han, S.-J.; Seo, J.

Int. J. Mass Spectrom. 2009, 283, 185–190.

   25. Mass-Balanced 1H/2H-Isotope Dipeptide Tag for Simultaneous Protein Quantification and Identification

Seo, J.; Suh, M.-S, Thangadurai, T. D.; Kim, J.; Rhee, Y. H.; Yoon, H.-J.; Shin, S. K.*

Anal. Chem. 2008, 80, 6145–6153. (accelerated article)

   26. The Kinetics of Competing Multiple-Barrier Unimolecular Dissociations of o-, m-, and p-Chlorotoluene Radical Cations

Seo J.; Seo, H.-I.; Kim, S.-J.; Shin, S. K.*

J. Phys. Chem. A 2008, 112, 6877–6883.

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